Gene editing Tissue clearing Digital health Misc
Reprints are available upon request.
Sarvenaz Choobdar, Mehmet E. Ahsen, Jake Crawford, Mattia Tomasoni, David Lamparter, Junyuan Lin, Benjamin Hescott, Xiaozhe Hu, Johnathan Mercer, Ted Natoli, Rajiv Narayan, The DREAM Module Identification Challenge Consortium, Aravind Subramanian, Gustavo Stolovitzky, Zoltán Kutalik, Kasper Lage, Donna K. Slonim, Julio Saez-Rodriguez, Lenore J. Cowen, Sven Bergmann, Daniel Marbach (2018). "
Open community challenge reveals molecular network modules with key roles in diseases", bioRxiv 265553. Misc 2017
LS Lo, J Galloway, B Ploderer, D Perrin (2017). "
Armbeta: towards accessible wearable technology to quantify upper limb movement and activities", Proceedings of the 29th Australian Conference on Computer-Human Interaction (OzCHI), pp. 356-360. Digital health B Zhou, SS Ho, X Zhu, X Zhang, N Spies, S Byeon, JG Arthur, R Pattni, N Ben-Efraim, MS Haney, RR Haraksingh, G Song, D Perrin, WH Wong, A Abyzov, AE Urban (2017). "
Comprehensive, Integrated, and Phased Whole-Genome Analysis of the Primary ENCODE Cell Line K562", bioRxiv 192344. Gene editing T Chappell, S Geva, JM Hogan, F Huygens, W Kelly, D Perrin (2017). "
Signature-based clustering for analysis of the wound microbiome", Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp. 339-346. Misc JB Stephansen, A Ambati, EB Leary, HE Moore, O Carrillo, L Lin, B Hogl, A Stefani, SC Hong, TW Kim, F Pizza, G Plazzi, S Vandi, E Antelmi, D Perrin, ST Kuna, PK Schweitzer, C Kushida, PE Peppard, P Jennum, HBD Sorensen, E Mignot (2017). "
The use of neural networks in the analysis of sleep stages and the diagnosis of narcolepsy", arXiv:1710.02094. Digital health 2016
F Tatsuki, GA Sunagawa, S Shi, EA Susaki, H Yukinaga, D Perrin, K Sumiyama, M Ukai-Tadenuma, H Fujishima, R Ohno, D Tone, KL Ode, K Matsumoto, HR Ueda (2016). "
Involvement of Ca2+-dependent hyperpolarization in sleep duration in mammals", Neuron 90(1):70-85. Gene editing Tissue clearing GA Sunagawa, K Sumiyama, M Ukai-Tadenuma, D Perrin, H Fujishima, H Ukai, O Nishimura, S Shi, R Ohno, R Narumi, Y Shimizu, D Tone, KL Ode, S Kuraku, HR Ueda (2016). "
Mammalian reverse genetics without crossing reveals Nr3a as a short-sleeper gene", Cell Reports 14(3):662-677. Gene editing 2015
K Tainaka, SI Kubota, TQ Suyama, EA Susaki, D Perrin, M Ukai-Tadenuma, H Ukai, HR Ueda (2014). "
Whole-body imaging with single-cell resolution by tissue decolorization", Cell 159(4):911-924. Tissue clearing HJ Ruskin, D Perrin, IA Roznovat (2014). "
Building cross-scale models of epigenetic mechanisms", Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp. 30-37. Misc CC Jolley, M Ukai-Tadenuma, D Perrin, HR Ueda (2014). "
A mammalian circadian clock model incorporating daytime expression elements", Biophysical Journal 107(6):1462-1473. Misc EA Susaki, K Tainaka, D Perrin, F Kishino, T Tawara, TM Watanabe, C Yokoyama, H Onoe, M Eguchi, S Yamaguchi, T Abe, H Kiyonari, Y Shimizu, A Miyawaki, H Yokota, HR Ueda (2014). "
Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis", Cell 157(3):726-739. Tissue clearing Earlier publications
For the complete list of publications from group leader Dimitri Perrin, please refer to
his Google Scholar profile